EnhancerDB
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  3. rs112617029[chr6:88424389]
Enhancers that have rs112617029[chr6:88424389]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs112617029[chr6:88424389]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88424376 88424390 PAX6 JASPAR yes 103323533
chr6 88424379 88424394 JUND JASPAR yes 103323534
chr6 88424382 88424397 JUND JASPAR yes 103323535
Genes associated with rs112617029[chr6:88424389], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More