EnhancerDB
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  3. rs112622452[chr16:85250175]
Enhancers that have rs112622452[chr16:85250175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112622452[chr16:85250175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85248672 85250583 ZNF143 GTRD no Epithelial (MCF-7) 21721352
chr16 85248684 85250600 TCF7L2 GTRD no Colon (HCT116) 21721353
chr16 85249154 85250613 TCF7L2 GTRD no Colon (HCT116) 21721355
chr16 85249243 85250534 TCF7L2 GTRD no Colon (HCT116) 21721356
chr16 85249481 85250611 TCF7L2 GTRD no Colon (HCT116) 21721357
chr16 85249560 85250640 ZNF274 GTRD no Bone Marrow (K562) 21721359
chr16 85250091 85250367 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21721361
chr16 85250175 85250188 NR2F1 JASPAR yes 12033888
Genes associated with rs112622452[chr16:85250175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More