EnhancerDB
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  3. rs112654490[chr3:58019553]
Enhancers that have rs112654490[chr3:58019553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs112654490[chr3:58019553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58019541 58019556 FOXA1 JASPAR yes 2666927
chr3 58019542 58019557 FOXP1 JASPAR yes 2666929
chr3 58019543 58019554 FOXP2 JASPAR yes 2666930
chr3 58019543 58019555 FOXC2 JASPAR yes 2666931
chr3 58019544 58019555 FOXB1 JASPAR yes 2666934
chr3 58019544 58019555 FOXC1 JASPAR yes 2666935
chr3 58019545 58019556 FOXA1 JASPAR yes 2666936
Genes associated with rs112654490[chr3:58019553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More