EnhancerDB
  1. Home
  2. SNP
  3. rs112787954[chr16:88849599]
Enhancers that have rs112787954[chr16:88849599]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs112787954[chr16:88849599]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88849587 88849601 GLIS3 JASPAR yes 12304069
chr16 88849589 88849603 GLIS2 JASPAR yes 12304070
chr16 88849599 88849604 GATA2 JASPAR yes 12304071
Genes associated with rs112787954[chr16:88849599], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More