EnhancerDB
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  3. rs112816479[chr11:20053055]
Enhancers that have rs112816479[chr11:20053055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 20020085 20069135 enh13838
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Lung (PC-9) Stomach Placenta Thyroid Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs112816479[chr11:20053055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 20052803 20053247 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 107961545
chr11 20053045 20053055 NFIA JASPAR yes 37828667
chr11 20053054 20053075 IRF1 JASPAR yes 37828669
Genes associated with rs112816479[chr11:20053055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More