EnhancerDB
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  3. rs112828702[chr1:205270077]
Enhancers that have rs112828702[chr1:205270077]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205259785 205270135 enh12589
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs112828702[chr1:205270077]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205268811 205270218 TCF7L2 GTRD no Colon (HCT116) 21371750
chr1 205269924 205270834 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861803
chr1 205269924 205270988 POLR2A UCSC Txn Factor no Conserved 107861804
chr1 205270077 205270098 IRF1 JASPAR yes 34753520
Genes associated with rs112828702[chr1:205270077], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More