EnhancerDB
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  3. rs112848916[chr16:88825940]
Enhancers that have rs112848916[chr16:88825940]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs112848916[chr16:88825940]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 21736869
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 108223300
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 21736870
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 108223301
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 21736871
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 108223302
chr16 88825512 88827616 ZNF143 GTRD no Epithelial (MCF-7) 21736872
chr16 88825512 88827616 ZNF143 GTRD no Epithelial (MCF-7) 108223303
chr16 88825532 88829851 POLR2A UCSC Txn Factor no Conserved 108223304
chr16 88825564 88827599 ZNF143 GTRD no Epithelial (MCF-7) 21736873
chr16 88825564 88827599 ZNF143 GTRD no Epithelial (MCF-7) 108223305
chr16 88825575 88827571 ZNF143 GTRD no Epithelial (MCF-7) 21736874
chr16 88825575 88827571 ZNF143 GTRD no Epithelial (MCF-7) 108223306
chr16 88825699 88826980 AR GTRD no Prostate (PC-3) 21736875
chr16 88825699 88826980 AR GTRD no Prostate (PC-3) 108223307
chr16 88825872 88826971 ZBTB33 GTRD no Lung (A549) 108223308
chr16 88825930 88825942 ZBTB7C JASPAR yes 12300663
chr16 88825931 88825943 ZBTB7A JASPAR yes 12300664
chr16 88825934 88825944 SP1 JASPAR yes 12300666
chr16 88825935 88825944 SP1 TRANSFAC yes 12300667
chr16 88825936 88825941 SP1 TRANSFAC yes 12300668
chr16 88825937 88825942 SP1 TRANSFAC yes 12300669
chr16 88825937 88825943 SP1 TRANSFAC yes 12300670
chr16 88825940 88825945 SP1 TRANSFAC yes 12300671
chr16 88825940 88825947 SP1 TRANSFAC yes 12300672
chr16 88825940 88825949 SP1 TRANSFAC yes 12300673
Genes associated with rs112848916[chr16:88825940], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More