EnhancerDB
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  3. rs11291485[chr15:42217257]
Enhancers that have rs11291485[chr15:42217257]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11291485[chr15:42217257]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42217254 42217269 FOXP1 JASPAR yes 23005864
chr15 42217255 42217270 FOXP1 JASPAR yes 23005865
chr15 42217256 42217271 FOXP1 JASPAR yes 23005866
chr15 42217257 42217272 FOXP1 JASPAR yes 23005867
chr15 42217257 42217278 IRF1 JASPAR yes 23005868
Genes associated with rs11291485[chr15:42217257], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More