EnhancerDB
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  3. rs113042236[chr1:19732354]
Enhancers that have rs113042236[chr1:19732354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19711685 19745775 enh98
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs113042236[chr1:19732354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19732344 19732356 POU3F1 JASPAR yes 27186280
chr1 19732345 19732356 NFIL3 JASPAR yes 27186281
chr1 19732345 19732363 SRF JASPAR yes 27186282
chr1 19732346 19732358 DBP JASPAR yes 27186283
chr1 19732346 19732358 HLF JASPAR yes 27186284
chr1 19732348 19732362 TCF7L2 JASPAR yes 27186285
chr1 19732348 19732363 LEF1 JASPAR yes 27186286
Genes associated with rs113042236[chr1:19732354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More