EnhancerDB
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  3. rs11308900[chr5:153740010]
Enhancers that have rs11308900[chr5:153740010]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 153729285 153755555 enh38536
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs11308900[chr5:153740010]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 153740005 153740020 MEF2C JASPAR yes 67028776
chr5 153740006 153740021 MEF2A JASPAR yes 67028777
chr5 153740008 153740023 FOXP1 JASPAR yes 67028778
chr5 153740009 153740015 TBP TRANSFAC yes 67028779
chr5 153740009 153740024 FOXP1 JASPAR yes 67028780
chr5 153740010 153740025 FOXP1 JASPAR yes 67028781
chr5 153740010 153740031 IRF1 JASPAR yes 67028782
Genes associated with rs11308900[chr5:153740010], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More