EnhancerDB
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  3. rs113090705[chr14:55568402]
Enhancers that have rs113090705[chr14:55568402]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55550545 55578795 enh15631
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs113090705[chr14:55568402]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55568127 55568690 TEF1 GTRD no Bone (Osteoblast) 21620010
chr14 55568219 55568611 ZNF274 GTRD no Bone Marrow (K562) 21620011
chr14 55568235 55568578 ZNF274 GTRD no Liver (HepG2) 21620012
chr14 55568242 55568672 ZNF143 GTRD no Epithelial (MCF-7) 21620013
chr14 55568332 55568626 TCF7L2 GTRD no Colon (HCT116) 21620014
chr14 55568355 55568619 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21620015
chr14 55568385 55568406 IRF1 JASPAR yes 115529659
chr14 55568389 55568410 IRF1 JASPAR yes 115529660
chr14 55568390 55568405 FOXP1 JASPAR yes 115529661
chr14 55568391 55568412 IRF1 JASPAR yes 115529662
chr14 55568395 55568410 FOXP1 JASPAR yes 115529663
chr14 55568395 55568416 IRF1 JASPAR yes 115529664
chr14 55568396 55568411 FOXP1 JASPAR yes 115529665
chr14 55568397 55568412 FOXP1 JASPAR yes 115529666
chr14 55568397 55568418 IRF1 JASPAR yes 115529667
chr14 55568398 55568413 FOXP1 JASPAR yes 115529668
Genes associated with rs113090705[chr14:55568402], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More