EnhancerDB
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  3. rs11309413[chr1:117404398]
Enhancers that have rs11309413[chr1:117404398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs11309413[chr1:117404398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117404330 117405565 ZNF143 GTRD no Epithelial (MCF-7) 21333990
chr1 117404386 117404407 IRF1 JASPAR yes 31846025
chr1 117404392 117404413 IRF1 JASPAR yes 31846026
chr1 117404393 117404414 IRF1 JASPAR yes 31846027
chr1 117404397 117404412 FOXP1 JASPAR yes 31846028
chr1 117404398 117404413 FOXP1 JASPAR yes 31846029
Genes associated with rs11309413[chr1:117404398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More