EnhancerDB
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  3. rs113139779[chr1:212782718]
Enhancers that have rs113139779[chr1:212782718]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212765205 212784697 enh12647
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs113139779[chr1:212782718]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212780052 212787859 POLR2A UCSC Txn Factor no Conserved 107869176
chr1 212780418 212782777 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107869178
chr1 212782710 212782730 RREB1 JASPAR yes 35141443
chr1 212782712 212782732 RREB1 JASPAR yes 35141444
chr1 212782714 212782719 SP1 TRANSFAC yes 35141445
chr1 212782714 212782724 ZNF740 JASPAR yes 35141446
chr1 212782715 212782725 SP1 JASPAR yes 35141447
chr1 212782715 212782725 ZNF740 JASPAR yes 35141448
chr1 212782716 212782726 SP1 JASPAR yes 35141449
chr1 212782716 212782726 ZNF740 JASPAR yes 35141450
chr1 212782717 212782727 SP1 JASPAR yes 35141451
chr1 212782717 212782727 ZNF740 JASPAR yes 35141452
chr1 212782717 212782732 NR2C2 JASPAR yes 35141453
chr1 212782718 212782728 SP1 JASPAR yes 35141454
chr1 212782718 212782728 ZNF740 JASPAR yes 35141455
Genes associated with rs113139779[chr1:212782718], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More