EnhancerDB
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  3. rs113163288[chr12:125228727]
Enhancers that have rs113163288[chr12:125228727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs113163288[chr12:125228727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125228200 125228845 P63 GTRD no Skin (Keratinocyte) 21582581
chr12 125228331 125228985 ZNF274 GTRD no Bone Marrow (K562) 21582582
chr12 125228444 125229133 ZBTB33 GTRD no Lung (A549) 21582583
chr12 125228457 125228854 P63 GTRD no Skin (Keratinocyte) 21582584
chr12 125228468 125228964 ZNF274 GTRD no Bone Marrow (K562) 21582585
chr12 125228495 125229073 ZNF274 GTRD no Bone Marrow (K562) 21582586
chr12 125228521 125229271 ZNF274 GTRD no Bone Marrow (K562) 21582587
chr12 125228536 125229325 ZNF274 GTRD no Blood (GM12878) 21582588
chr12 125228536 125229325 ZNF274 GTRD no Blood (GM12878) 108069730
chr12 125228572 125229107 ZNF274 GTRD no Bone Marrow (K562) 21582589
chr12 125228608 125228887 ZNF274 GTRD no Blood (GM12878) 21582590
chr12 125228608 125229034 ZNF274 GTRD no Bone Marrow (K562) 21582591
chr12 125228613 125229148 ZBTB33 GTRD no Lung (A549) 21582592
chr12 125228621 125229086 ZBTB33 GTRD no Lung (A549) 21582593
chr12 125228624 125229113 ZNF274 GTRD no Liver (HepG2) 21582594
chr12 125228634 125228896 ZNF274 GTRD no Blood (GM12878) 21582595
chr12 125228643 125228945 ZBTB33 GTRD no Brain (SK-N-SH) 21582596
chr12 125228665 125229066 ZNF274 GTRD no Cervix (HeLa-S3) 21582597
chr12 125228677 125228968 ZBTB33 GTRD no Brain (SK-N-SH) 21582598
chr12 125228700 125229034 ZNF274 GTRD no Bone Marrow (K562) 21582599
chr12 125228714 125228727 JUN JASPAR yes 124416619
chr12 125228726 125228740 IRF7 JASPAR yes 124416620
chr12 125228727 125228742 PRDM1 JASPAR yes 124416621
Genes associated with rs113163288[chr12:125228727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More