EnhancerDB
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  3. rs113228933[chr5:77880974]
Enhancers that have rs113228933[chr5:77880974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs113228933[chr5:77880974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77880967 77880976 SNAI2 JASPAR yes 63602810
chr5 77880967 77880977 ID4 JASPAR yes 63602811
chr5 77880967 77880977 TCF3 JASPAR yes 63602812
chr5 77880967 77880977 TCF4 JASPAR yes 63602813
chr5 77880972 77880981 HIC2 JASPAR yes 63602814
chr5 77880972 77880988 GLIS1 JASPAR yes 63602815
Genes associated with rs113228933[chr5:77880974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More