EnhancerDB
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  3. rs113252974[chr12:125239912]
Enhancers that have rs113252974[chr12:125239912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125239604 125239956 vista15336
VISTA
Transcript factors that have rs113252974[chr12:125239912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125239847 125240131 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21582863
chr12 125239847 125240131 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108069857
chr12 125239864 125240128 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21582864
chr12 125239864 125240128 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108069858
chr12 125239908 125239922 MTF1 JASPAR yes 82498137
chr12 125239908 125239922 MTF1 JASPAR yes 124418147
Genes associated with rs113252974[chr12:125239912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More