EnhancerDB
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  3. rs11327389[chr16:88823955]
Enhancers that have rs11327389[chr16:88823955]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88819352 88850435 enh16903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11327389[chr16:88823955]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 21736869
chr16 88823154 88827493 TCF7L2 GTRD no Colon (HCT116) 108223300
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 21736870
chr16 88823627 88827542 TCF7L2 GTRD no Colon (HCT116) 108223301
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 21736871
chr16 88823651 88829212 TCF7L2 GTRD no Colon (HCT116) 108223302
chr16 88823946 88823961 NFYB JASPAR yes 12300435
chr16 88823948 88823964 NFYA JASPAR yes 12300436
chr16 88823949 88823967 NFYA JASPAR yes 12300437
chr16 88823953 88823957 H1TF2 TRANSFAC yes 12300438
chr16 88823953 88823957 NFE TRANSFAC yes 12300439
chr16 88823953 88823957 SRF TRANSFAC yes 12300440
Genes associated with rs11327389[chr16:88823955], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More