EnhancerDB
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  3. rs113338019[chr12:125185347]
Enhancers that have rs113338019[chr12:125185347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs113338019[chr12:125185347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125184986 125187706 TCF7L2 GTRD no Colon (HCT116) 21581969
chr12 125184986 125187706 TCF7L2 GTRD no Colon (HCT116) 108069467
chr12 125185000 125185531 FLI1 GTRD no Muscle (A673) 21581970
chr12 125185003 125187668 TCF7L2 GTRD no Colon (HCT116) 21581971
chr12 125185003 125187668 TCF7L2 GTRD no Colon (HCT116) 108069468
chr12 125185010 125186427 ZNF274 GTRD no Bone Marrow (K562) 21581972
chr12 125185010 125186427 ZNF274 GTRD no Bone Marrow (K562) 108069469
chr12 125185017 125187740 TCF7L2 GTRD no Colon (HCT116) 21581973
chr12 125185017 125187740 TCF7L2 GTRD no Colon (HCT116) 108069470
chr12 125185076 125187752 ZNF143 GTRD no Epithelial (MCF-7) 21581974
chr12 125185076 125187752 ZNF143 GTRD no Epithelial (MCF-7) 108069471
chr12 125185090 125185773 ZBTB33 GTRD no Lung (A549) 21581975
chr12 125185108 125185596 SOX2 GTRD no Neural Stem Cells (H9) 21581976
chr12 125185119 125186687 ZNF274 GTRD no Bone Marrow (K562) 21581977
chr12 125185119 125186687 ZNF274 GTRD no Bone Marrow (K562) 108069472
chr12 125185150 125185493 ZNF274 GTRD no Bone Marrow (K562) 21581978
chr12 125185156 125186569 SOX2 GTRD no Neural Stem Cells (H9) 21581979
chr12 125185156 125186569 SOX2 GTRD no Neural Stem Cells (H9) 108069473
chr12 125185169 125185664 ZNF274 GTRD no Bone Marrow (K562) 21581980
chr12 125185184 125187706 ZNF143 GTRD no Epithelial (MCF-7) 21581981
chr12 125185184 125187706 ZNF143 GTRD no Epithelial (MCF-7) 108069474
chr12 125185185 125185652 ZNF274 GTRD no Bone Marrow (K562) 21581982
chr12 125185203 125185793 ZNF274 GTRD no Bone Marrow (K562) 21581983
chr12 125185213 125187686 TCF7L2 GTRD no Colon (HCT116) 21581984
chr12 125185213 125187686 TCF7L2 GTRD no Colon (HCT116) 108069475
chr12 125185216 125187234 ZNF143 GTRD no Epithelial (MCF-7) 21581985
chr12 125185216 125187234 ZNF143 GTRD no Epithelial (MCF-7) 108069476
chr12 125185251 125186727 ZNF143 GTRD no Epithelial (MCF-7) 21581986
chr12 125185251 125186727 ZNF143 GTRD no Epithelial (MCF-7) 108069477
chr12 125185305 125185493 SOX2 GTRD no Neural Stem Cells (H9) 21581987
chr12 125185308 125187789 TCF7L2 GTRD no Colon (HCT116) 21581988
chr12 125185308 125187789 TCF7L2 GTRD no Colon (HCT116) 108069478
chr12 125185328 125185548 SOX2 GTRD no Neural Stem Cells (H9) 21581989
chr12 125185341 125185353 TFAP2A JASPAR yes 124410575
chr12 125185341 125185353 TFAP2B JASPAR yes 124410576
chr12 125185341 125185353 TFAP2C JASPAR yes 124410577
chr12 125185341 125185356 TFAP2A JASPAR yes 124410578
chr12 125185342 125185351 TFAP2A JASPAR yes 124410579
chr12 125185347 125186431 ZBTB33 GTRD no Lung (A549) 21581990
chr12 125185347 125186431 ZBTB33 GTRD no Lung (A549) 108069479
Genes associated with rs113338019[chr12:125185347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More