EnhancerDB
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  3. rs113377177[chr5:172305364]
Enhancers that have rs113377177[chr5:172305364]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr5 172304783 172305546 vista50188
VISTA
Transcript factors that have rs113377177[chr5:172305364]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172305353 172305364 USF1 JASPAR yes 67838325
chr5 172305353 172305364 USF2 JASPAR yes 67838326
chr5 172305353 172305364 USF1 JASPAR yes 70764319
chr5 172305353 172305364 USF2 JASPAR yes 70764320
chr5 172305358 172305372 PLAG1 JASPAR yes 67838327
chr5 172305358 172305372 PLAG1 JASPAR yes 70764321
Genes associated with rs113377177[chr5:172305364], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More