EnhancerDB
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  3. rs113399409[chr5:77795854]
Enhancers that have rs113399409[chr5:77795854]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs113399409[chr5:77795854]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77795841 77795856 FOXP1 JASPAR yes 63593050
chr5 77795841 77795862 IRF1 JASPAR yes 63593051
chr5 77795842 77795857 FOXP1 JASPAR yes 63593052
chr5 77795842 77795863 IRF1 JASPAR yes 63593053
chr5 77795845 77795860 FOXP1 JASPAR yes 63593055
chr5 77795845 77795866 IRF1 JASPAR yes 63593056
chr5 77795846 77795861 FOXP1 JASPAR yes 63593057
chr5 77795847 77795862 FOXP1 JASPAR yes 63593058
chr5 77795853 77795867 SPI1 JASPAR yes 63593059
chr5 77795853 77795867 SPIC JASPAR yes 63593060
Genes associated with rs113399409[chr5:77795854], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More