EnhancerDB
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  3. rs11341588[chr1:234627251]
Enhancers that have rs11341588[chr1:234627251]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11341588[chr1:234627251]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234626231 234628484 TEF1 GTRD no Bone (Osteoblast) 21393225
chr1 234626744 234627294 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393226
chr1 234626759 234627275 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393227
chr1 234626780 234627276 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393228
chr1 234626798 234627254 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393229
chr1 234626805 234627995 ZNF274 GTRD no Bone Marrow (K562) 21393230
chr1 234626871 234627327 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393239
chr1 234626892 234627696 ZNF274 GTRD no Bone Marrow (K562) 21393242
chr1 234626910 234627577 ZNF274 GTRD no Cervix (HeLa-S3) 21393244
chr1 234626967 234627419 ZNF274 GTRD no Liver (HepG2) 21393247
chr1 234626996 234627489 ZNF143 GTRD no Epithelial (MCF-7) 21393248
chr1 234627005 234627329 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21393249
chr1 234627016 234627738 P63 GTRD no Skin (Keratinocyte) 21393250
chr1 234627027 234627433 ZNF274 GTRD no Liver (HepG2) 21393251
chr1 234627153 234628217 ZNF274 GTRD no Liver (HepG2) 21393252
chr1 234627173 234627992 ZNF274 GTRD no Liver (HepG2) 21393253
chr1 234627219 234627582 ZNF143 GTRD no Epithelial (MCF-7) 21393254
Genes associated with rs11341588[chr1:234627251], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More