EnhancerDB
  1. Home
  2. SNP
  3. rs113442962[chr6:47111239]
Enhancers that have rs113442962[chr6:47111239]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs113442962[chr6:47111239]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47111224 47111239 RFX5 JASPAR yes 102003408
chr6 47111233 47111241 HOXA5 JASPAR yes 102003409
chr6 47111233 47111254 IRF1 JASPAR yes 102003410
chr6 47111234 47111255 IRF1 JASPAR yes 102003411
chr6 47111238 47111253 FOXP1 JASPAR yes 102003412
chr6 47111239 47111254 FOXP1 JASPAR yes 102003413
Genes associated with rs113442962[chr6:47111239], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More