EnhancerDB
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  3. rs113478027[chr12:125240048]
Enhancers that have rs113478027[chr12:125240048]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs113478027[chr12:125240048]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125239847 125240131 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21582863
chr12 125239847 125240131 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108069857
chr12 125239864 125240128 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21582864
chr12 125239864 125240128 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108069858
chr12 125239945 125240934 ZNF274 GTRD no Liver (HepG2) 21582865
chr12 125239945 125240934 ZNF274 GTRD no Liver (HepG2) 108069859
chr12 125240023 125240411 ZNF274 GTRD no Liver (HepG2) 21582866
chr12 125240029 125240050 ZNF263 JASPAR yes 124418165
chr12 125240031 125240052 ZNF263 JASPAR yes 124418167
chr12 125240045 125240065 TP53 JASPAR yes 124418171
chr12 125240046 125240067 ZNF263 JASPAR yes 124418172
Genes associated with rs113478027[chr12:125240048], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More