EnhancerDB
  1. Home
  2. SNP
  3. rs113530426[chr1:39860471]
Enhancers that have rs113530426[chr1:39860471]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39853990 39867590 enh11763
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs113530426[chr1:39860471]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39860459 39860479 PPARG JASPAR yes 28273023
chr1 39860469 39860477 GATA5 JASPAR yes 28273024
Genes associated with rs113530426[chr1:39860471], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More