EnhancerDB
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  3. rs113649226[chr6:43666666]
Enhancers that have rs113649226[chr6:43666666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43661268 43695735 enh9137
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs113649226[chr6:43666666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43666660 43666681 IRF1 JASPAR yes 101775297
Genes associated with rs113649226[chr6:43666666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 43573053 43596899 - GTPBP2 ENSG00000172432.14 43596899 69767 Esophagus 0.0978373 6621
chr6 43445261 43474294 + TJAP1 ENSG00000137221.10 43445261 192372 Thyroid 5.81415e-08 6615
chr6 43445261 43474294 + TJAP1 ENSG00000137221.10 43445261 192372 Lung 2.71695e-07 6615