EnhancerDB
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  3. rs11377681[chr6:88431728]
Enhancers that have rs11377681[chr6:88431728]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs11377681[chr6:88431728]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88431708 88431729 IRF1 JASPAR yes 103324759
chr6 88431712 88431733 IRF1 JASPAR yes 103324761
chr6 88431714 88431735 IRF1 JASPAR yes 103324762
chr6 88431718 88431739 IRF1 JASPAR yes 103324763
chr6 88431720 88431735 PRDM1 JASPAR yes 103324764
chr6 88431720 88431735 STAT2 JASPAR yes 103324765
chr6 88431721 88431735 SPIC JASPAR yes 103324766
chr6 88431721 88431735 STAT1 JASPAR yes 103324767
chr6 88431722 88431743 IRF1 JASPAR yes 103324768
chr6 88431723 88431738 FOXP1 JASPAR yes 103324769
chr6 88431723 88431744 IRF1 JASPAR yes 103324770
chr6 88431725 88431740 FOXP1 JASPAR yes 103324771
chr6 88431727 88431742 FOXP1 JASPAR yes 103324772
chr6 88431728 88431743 FOXP1 JASPAR yes 103324773
Genes associated with rs11377681[chr6:88431728], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More