EnhancerDB
  1. Home
  2. SNP
  3. rs1138239[chr3:185484312]
Enhancers that have rs1138239[chr3:185484312]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 185460642 185522464 enh21175
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs1138239[chr3:185484312]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 185484306 185484316 HOXA13 JASPAR yes 8286309
chr3 185484306 185484316 HOXB13 JASPAR yes 8286310
chr3 185484306 185484316 HOXD13 JASPAR yes 8286311
chr3 185484306 185484317 HOXA10 JASPAR yes 8286312
chr3 185484307 185484316 CDX1 JASPAR yes 8286313
chr3 185484307 185484318 CDX2 JASPAR yes 8286314
chr3 185484312 185484326 TLX1 JASPAR yes 8286315
Genes associated with rs1138239[chr3:185484312], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More