EnhancerDB
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  3. rs113884479[chr17:2798656]
Enhancers that have rs113884479[chr17:2798656]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs113884479[chr17:2798656]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 21739739
chr17 2795210 2800120 ZNF143 GTRD no Epithelial (MCF-7) 108231314
chr17 2795895 2799236 TCF7L2 GTRD no Colon (HCT116) 21739754
chr17 2795895 2799236 TCF7L2 GTRD no Colon (HCT116) 108231342
chr17 2798647 2798662 RUNX2 JASPAR yes 52783716
chr17 2798654 2798669 TFAP2A JASPAR yes 52783717
chr17 2798656 2798671 TFAP2A JASPAR yes 52783718
chr17 2798656 2798671 TFAP2C JASPAR yes 52783719
Genes associated with rs113884479[chr17:2798656], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More