EnhancerDB
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  3. rs113887838[chr6:11201779]
Enhancers that have rs113887838[chr6:11201779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 11200230 11227635 enh23016
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs113887838[chr6:11201779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 11201767 11201782 PRDM1 JASPAR yes 99863335
chr6 11201769 11201779 GABPA JASPAR yes 99863336
Genes associated with rs113887838[chr6:11201779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More