EnhancerDB
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  3. rs113888987[chr15:42214580]
Enhancers that have rs113888987[chr15:42214580]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs113888987[chr15:42214580]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42214575 42214583 MEIS3 JASPAR yes 23005520
chr15 42214576 42214580 NFE TRANSFAC yes 23005521
chr15 42214578 42214599 IRF1 JASPAR yes 23005522
chr15 42214580 42214600 RREB1 JASPAR yes 23005523
Genes associated with rs113888987[chr15:42214580], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More