EnhancerDB
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  3. rs113969456[chr1:27868146]
Enhancers that have rs113969456[chr1:27868146]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
Transcript factors that have rs113969456[chr1:27868146]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27866892 27870463 ZNF274 GTRD no Bone Marrow (K562) 107802587
chr1 27868133 27868154 IRF1 JASPAR yes 27707157
chr1 27868135 27868150 STAT2 JASPAR yes 27707158
chr1 27868138 27868153 FOXP1 JASPAR yes 27707159
chr1 27868139 27868154 FOXP1 JASPAR yes 27707160
chr1 27868140 27868155 FOXP1 JASPAR yes 27707161
chr1 27868141 27868156 FOXP1 JASPAR yes 27707162
chr1 27868142 27868157 FOXP1 JASPAR yes 27707163
chr1 27868143 27868158 FOXP1 JASPAR yes 27707164
chr1 27868144 27868159 FOXP1 JASPAR yes 27707165
Genes associated with rs113969456[chr1:27868146], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More