EnhancerDB
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  3. rs11397909[chr5:79496305]
Enhancers that have rs11397909[chr5:79496305]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 79474525 79496555 enh22393
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11397909[chr5:79496305]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 79496302 79496317 FOXP1 JASPAR yes 63705613
chr5 79496302 79496323 IRF1 JASPAR yes 63705614
chr5 79496304 79496324 RREB1 JASPAR yes 63705615
chr5 79496305 79496316 FOXP2 JASPAR yes 63705616
Genes associated with rs11397909[chr5:79496305], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More