EnhancerDB
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  3. rs11402061[chr1:234635598]
Enhancers that have rs11402061[chr1:234635598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs11402061[chr1:234635598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234635143 234635663 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393481
chr1 234635337 234635993 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107880066
chr1 234635443 234635728 ZNF274 GTRD no Bone Marrow (K562) 21393482
chr1 234635500 234635776 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393483
chr1 234635542 234635682 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393484
chr1 234635571 234635680 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21393485
chr1 234635592 234635601 PITX3 JASPAR yes 36279470
chr1 234635592 234635602 GSC2 JASPAR yes 36279471
chr1 234635592 234635602 GSC JASPAR yes 36279472
chr1 234635593 234635601 RHOXF1 JASPAR yes 36279473
chr1 234635596 234635608 INSM1 JASPAR yes 36279474
Genes associated with rs11402061[chr1:234635598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More