EnhancerDB
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  3. rs11408488[chr3:153011938]
Enhancers that have rs11408488[chr3:153011938]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 152999949 153013375 enh21048
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11408488[chr3:153011938]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 153011924 153011938 POU4F1 JASPAR yes 6758983
chr3 153011924 153011939 HNF1A JASPAR yes 6758984
chr3 153011925 153011939 POU4F1 JASPAR yes 6758985
chr3 153011925 153011941 POU4F3 JASPAR yes 6758986
chr3 153011927 153011942 FOXP1 JASPAR yes 6758987
chr3 153011929 153011941 FOXC2 JASPAR yes 6758988
chr3 153011930 153011941 FOXP2 JASPAR yes 6758989
chr3 153011932 153011940 FOXG1 JASPAR yes 6758992
chr3 153011932 153011940 FOXO3 JASPAR yes 6758993
chr3 153011936 153011942 SOX10 JASPAR yes 6758994
Genes associated with rs11408488[chr3:153011938], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More