EnhancerDB
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  3. rs114202580[chr6:30794714]
Enhancers that have rs114202580[chr6:30794714]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs114202580[chr6:30794714]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30794704 30794716 PKNOX2 JASPAR yes 101055916
chr6 30794709 30794717 MEIS2 JASPAR yes 101055918
chr6 30794709 30794717 MEIS3 JASPAR yes 101055919
chr6 30794710 30794714 NFE TRANSFAC yes 101055920
chr6 30794711 30794728 PAX1 JASPAR yes 101055921
chr6 30794712 30794726 PAX6 JASPAR yes 101055922
Genes associated with rs114202580[chr6:30794714], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More