EnhancerDB
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  3. rs11427538[chr2:70345847]
Enhancers that have rs11427538[chr2:70345847]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 70317005 70376348 enh5639
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11427538[chr2:70345847]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 70345841 70345856 FOXP1 JASPAR yes 74896988
chr2 70345841 70345862 IRF1 JASPAR yes 74896989
chr2 70345845 70345859 STAT1 JASPAR yes 74896990
chr2 70345845 70345860 STAT2 JASPAR yes 74896991
chr2 70345846 70345861 FOXP1 JASPAR yes 74896992
Genes associated with rs11427538[chr2:70345847], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More