EnhancerDB
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  3. rs114343946[chr1:39627992]
Enhancers that have rs114343946[chr1:39627992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs114343946[chr1:39627992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39627980 39627995 FOXP1 JASPAR yes 28260741
chr1 39627981 39627992 FOXA1 JASPAR yes 28260742
chr1 39627981 39627996 FOXA1 JASPAR yes 28260743
chr1 39627982 39627993 FOXB1 JASPAR yes 28260745
chr1 39627982 39627993 FOXC1 JASPAR yes 28260746
chr1 39627982 39627994 FOXC2 JASPAR yes 28260747
chr1 39627983 39627994 FOXP2 JASPAR yes 28260748
chr1 39627991 39627997 GATA3 JASPAR yes 28260749
Genes associated with rs114343946[chr1:39627992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More