EnhancerDB
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  3. rs11442640[chr2:227524978]
Enhancers that have rs11442640[chr2:227524978]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs11442640[chr2:227524978]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227524966 227524987 IRF1 JASPAR yes 81480178
chr2 227524973 227524979 LEF1 TRANSFAC yes 81480179
chr2 227524973 227524979 SOX10 JASPAR yes 81480180
chr2 227524973 227524988 FOXP1 JASPAR yes 81480181
chr2 227524974 227524985 FOXP2 JASPAR yes 81480182
chr2 227524974 227524986 FOXC2 JASPAR yes 81480183
Genes associated with rs11442640[chr2:227524978], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More