EnhancerDB
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  3. rs114605456[chr12:52514858]
Enhancers that have rs114605456[chr12:52514858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs114605456[chr12:52514858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52513207 52519034 P63 GTRD no Skin (Keratinocyte) 21546171
chr12 52513239 52515430 P63 GTRD no Skin (Keratinocyte) 21546177
chr12 52513384 52515273 P63 GTRD no Skin (Keratinocyte) 21546181
chr12 52514846 52514863 RARA JASPAR yes 120918848
chr12 52514847 52514866 CTCF JASPAR yes 120918849
chr12 52514854 52514867 NR2F1 JASPAR yes 120918850
chr12 52514856 52514864 NR4A2 JASPAR yes 120918851
chr12 52514858 52514862 ESR1 TRANSFAC yes 120918852
Genes associated with rs114605456[chr12:52514858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More