EnhancerDB
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  3. rs114716190[chr6:29933320]
Enhancers that have rs114716190[chr6:29933320]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 29930235 29938316 enh9028
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs114716190[chr6:29933320]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 29932458 29934374 POLR2A UCSC Txn Factor no Conserved 108539442
chr6 29932458 29934374 POLR2A UCSC Txn Factor no Conserved 108539443
chr6 29933305 29933320 HNF1A JASPAR yes 101018689
chr6 29933315 29933329 GATA2 JASPAR yes 101018691
chr6 29933317 29933324 GATA3 TRANSFAC yes 101018692
chr6 29933317 29933325 GATA5 JASPAR yes 101018693
chr6 29933320 29933323 MYB TRANSFAC yes 101018694
Genes associated with rs114716190[chr6:29933320], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More