EnhancerDB
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  3. rs115009579[chr1:168437960]
Enhancers that have rs115009579[chr1:168437960]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs115009579[chr1:168437960]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168437361 168438090 ZNF274 GTRD no Liver (HepG2) 21348090
chr1 168437651 168438015 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21348093
chr1 168437950 168437962 PKNOX2 JASPAR yes 32927998
chr1 168437951 168437961 ID4 JASPAR yes 32927999
chr1 168437951 168437961 TCF3 JASPAR yes 32928000
chr1 168437951 168437961 TCF4 JASPAR yes 32928001
chr1 168437952 168437961 SNAI2 JASPAR yes 32928002
chr1 168437955 168437963 MEIS2 JASPAR yes 32928004
chr1 168437955 168437963 MEIS3 JASPAR yes 32928005
chr1 168437956 168437960 NFE TRANSFAC yes 32928006
Genes associated with rs115009579[chr1:168437960], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More