EnhancerDB
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  3. rs115017689[chr12:125252983]
Enhancers that have rs115017689[chr12:125252983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115017689[chr12:125252983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125252652 125253039 ZNF143 GTRD no Epithelial (MCF-7) 21582982
chr12 125252966 125252987 IRF1 JASPAR yes 124419851
chr12 125252971 125252986 STAT2 JASPAR yes 124419852
chr12 125252972 125252987 FOXP1 JASPAR yes 124419853
chr12 125252973 125252984 FOXA1 JASPAR yes 124419854
chr12 125252974 125252985 FOXC1 JASPAR yes 124419855
chr12 125252974 125252986 FOXC2 JASPAR yes 124419856
chr12 125252974 125252994 RREB1 JASPAR yes 124419857
chr12 125252975 125252986 FOXP2 JASPAR yes 124419858
chr12 125252977 125252986 SRY JASPAR yes 124419859
chr12 125252977 125252988 FOXA1 JASPAR yes 124419860
chr12 125252978 125252990 FOXC2 JASPAR yes 124419861
chr12 125252978 125252998 RREB1 JASPAR yes 124419862
chr12 125252979 125252991 FOXI1 JASPAR yes 124419863
chr12 125252983 125253003 RREB1 JASPAR yes 124419864
Genes associated with rs115017689[chr12:125252983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More