EnhancerDB
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  3. rs115042115[chr12:125197596]
Enhancers that have rs115042115[chr12:125197596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr12 125197556 125198099 vista15323
VISTA
Transcript factors that have rs115042115[chr12:125197596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125197563 125197867 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582172
chr12 125197563 125197867 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069550
chr12 125197570 125198100 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582173
chr12 125197570 125198100 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069551
chr12 125197571 125197967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582174
chr12 125197571 125197967 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069552
chr12 125197587 125197601 GLIS2 JASPAR yes 82497424
chr12 125197587 125197601 GLIS2 JASPAR yes 124412276
chr12 125197587 125198103 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582175
chr12 125197587 125198103 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069553
chr12 125197596 125197600 LFA1 TRANSFAC yes 82497425
chr12 125197596 125197600 LFA1 TRANSFAC yes 124412277
Genes associated with rs115042115[chr12:125197596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More