EnhancerDB
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  3. rs115047514[chr1:230280696]
Enhancers that have rs115047514[chr1:230280696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 230280348 230284066 vista144
VISTA
Transcript factors that have rs115047514[chr1:230280696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230279624 230280767 ZNF143 GTRD no Epithelial (MCF-7) 21391538
chr1 230279624 230280767 ZNF143 GTRD no Epithelial (MCF-7) 107686553
chr1 230279624 230280767 ZNF143 GTRD no Epithelial (MCF-7) 107878768
chr1 230280683 230280698 TFAP2C JASPAR yes 36026256
chr1 230280683 230280698 TFAP2C JASPAR yes 71160881
chr1 230280685 230280697 TFAP2A JASPAR yes 36026257
chr1 230280685 230280697 TFAP2A JASPAR yes 71160882
Genes associated with rs115047514[chr1:230280696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 231041989 231114621 - TTC13 ENSG00000143643.8 231114621 761293 Esophagus 0.254965 1943