EnhancerDB
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  3. rs115072390[chr6:47124852]
Enhancers that have rs115072390[chr6:47124852]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115072390[chr6:47124852]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47124850 47124860 EMX1 JASPAR yes 102005466
chr6 47124850 47124860 EMX2 JASPAR yes 102005467
chr6 47124850 47124860 EN2 JASPAR yes 102005468
chr6 47124850 47124860 ESX1 JASPAR yes 102005469
chr6 47124850 47124860 EVX1 JASPAR yes 102005470
chr6 47124850 47124860 EVX2 JASPAR yes 102005471
chr6 47124850 47124860 GBX1 JASPAR yes 102005472
chr6 47124850 47124860 GBX2 JASPAR yes 102005473
chr6 47124850 47124860 HESX1 JASPAR yes 102005474
chr6 47124850 47124860 HOXA2 JASPAR yes 102005475
chr6 47124850 47124860 HOXB2 JASPAR yes 102005476
chr6 47124850 47124860 HOXB3 JASPAR yes 102005477
chr6 47124850 47124860 LBX2 JASPAR yes 102005478
chr6 47124850 47124860 LHX2 JASPAR yes 102005479
chr6 47124850 47124860 LHX6 JASPAR yes 102005480
chr6 47124850 47124860 MEOX1 JASPAR yes 102005481
chr6 47124850 47124860 MEOX2 JASPAR yes 102005482
chr6 47124850 47124860 MIXL1 JASPAR yes 102005483
chr6 47124850 47124860 NOTO JASPAR yes 102005484
chr6 47124850 47124860 RAX JASPAR yes 102005485
chr6 47124851 47124859 DLX6 JASPAR yes 102005486
chr6 47124851 47124859 EN1 JASPAR yes 102005487
chr6 47124851 47124859 LBX1 JASPAR yes 102005488
chr6 47124851 47124859 PAX4 JASPAR yes 102005489
chr6 47124851 47124859 PDX1 JASPAR yes 102005490
chr6 47124851 47124859 VAX1 JASPAR yes 102005491
chr6 47124851 47124859 VAX2 JASPAR yes 102005492
chr6 47124851 47124859 VSX1 JASPAR yes 102005493
chr6 47124851 47124859 VSX2 JASPAR yes 102005494
chr6 47124851 47124861 POU6F2 JASPAR yes 102005495
chr6 47124851 47124865 POU1F1 JASPAR yes 102005496
chr6 47124852 47124864 POU3F1 JASPAR yes 102005497
chr6 47124852 47124864 POU3F2 JASPAR yes 102005498
chr6 47124852 47124865 POU3F3 JASPAR yes 102005499
Genes associated with rs115072390[chr6:47124852], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More