EnhancerDB
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  3. rs115080446[chr6:47101163]
Enhancers that have rs115080446[chr6:47101163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115080446[chr6:47101163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47101144 47101163 RFX2 JASPAR yes 102001616
chr6 47101148 47101164 RFX2 JASPAR yes 102001617
chr6 47101148 47101164 RFX3 JASPAR yes 102001618
chr6 47101148 47101164 RFX4 JASPAR yes 102001619
chr6 47101148 47101164 RFX5 JASPAR yes 102001620
chr6 47101149 47101168 RFX2 JASPAR yes 102001621
chr6 47101151 47101166 RFX5 JASPAR yes 102001622
chr6 47101160 47101170 ELK1 JASPAR yes 102001623
chr6 47101160 47101170 ELK3 JASPAR yes 102001624
chr6 47101160 47101170 ETV3 JASPAR yes 102001625
Genes associated with rs115080446[chr6:47101163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More