EnhancerDB
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  3. rs115085908[chr1:154390439]
Enhancers that have rs115085908[chr1:154390439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115085908[chr1:154390439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154390433 154390446 NR2F1 JASPAR yes 32290175
chr1 154390435 154390446 ESRRA JASPAR yes 32290176
chr1 154390435 154390446 ESRRB JASPAR yes 32290177
chr1 154390436 154390444 NR4A2 JASPAR yes 32290178
chr1 154390437 154390447 RORA JASPAR yes 32290179
Genes associated with rs115085908[chr1:154390439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More