EnhancerDB
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  3. rs115087054[chr7:2879162]
Enhancers that have rs115087054[chr7:2879162]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 2838125 2881021 enh23934
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115087054[chr7:2879162]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 2879159 2879169 ID4 JASPAR yes 12565172
chr7 2879159 2879169 TCF3 JASPAR yes 12565173
chr7 2879159 2879169 TCF4 JASPAR yes 12565174
chr7 2879160 2879169 SNAI2 JASPAR yes 12565175
chr7 2879161 2879166 USF2 TRANSFAC yes 12565176
Genes associated with rs115087054[chr7:2879162], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More