EnhancerDB
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  3. rs115099552[chr15:42208671]
Enhancers that have rs115099552[chr15:42208671]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs115099552[chr15:42208671]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42208659 42208679 RREB1 JASPAR yes 23004636
chr15 42208660 42208675 FOXP1 JASPAR yes 23004637
chr15 42208663 42208674 FOXP2 JASPAR yes 23004638
chr15 42208667 42208673 HiNF-A TRANSFAC yes 23004639
Genes associated with rs115099552[chr15:42208671], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More