EnhancerDB
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  3. rs115125249[chr1:41865123]
Enhancers that have rs115125249[chr1:41865123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs115125249[chr1:41865123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41865120 41865134 GLIS2 JASPAR yes 28385279
chr1 41865122 41865143 ZNF263 JASPAR yes 28385280
chr1 41865123 41865137 PLAG1 JASPAR yes 28385281
Genes associated with rs115125249[chr1:41865123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 40915774 40929390 + ZFP69B ENSG00000187801.10 40915774 935733 Pancreas 0.23616 564